Use the hybrid option... add hybrid='yes' to the copper0 and copper1 elements as seen below.
<connector id='connector98' type='female' name='5V@1'>
<description>5V@1</description>
<views>
<breadboardView>
<p layer='breadboard' svgId='connector98pin' />
</breadboardView>
<schematicView>
<p layer='schematic' svgId='connector98pin' terminalId='connector98terminal' hybrid='yes' />
</schematicView>
<pcbView>
<p layer='copper0' svgId='connector98pad' hybrid='yes' />
<p layer='copper1' svgId='connector98pad' hybrid='yes' />
</pcbView>
</views>